May 2018 Publications

ABVD Without Radiation for Newly Diagnosed Pediatric and Young Adult Patients With

Hodgkin Lymphoma: A Single Center Retrospective Analysis of 28 Consecutive

Patients.

Stieglitz E, Dinh T, Phelps AS, Pampaloni MH, Olshen AB, Robbins E.

J Pediatr Hematol Oncol. 2018 May;40(4):290-294.

 

Affect and Incident Participation Restriction in Adults With Knee Osteoarthritis.

Vaughan MW, LaValley MP, Felson DT, Orsmond GI, Niu J, Lewis CE, Segal NA,

Nevitt MC, Keysor JJ.

Arthritis Care Res (Hoboken). 2018 Apr;70(4):542-549.

 

Application of a multi-state model to Evaluate Visit Burden and Patient Stability to Improve Sustainability of HIV Treatment in Zambia.

Roy M, Holmes C, Sikazwe I, Savory T, Mwanza MW, Bolton Moore C, Mulenga K, Czaicki N, Glidden DV, Padian N, Geng E.

Clin Infect Dis. 2018 Apr 7.

 

Association of polygenic risk score with the risk of chronic lymphocytic leukemia

and monoclonal B-cell lymphocytosis.

Kleinstern G, Camp NJ, Goldin LR, Vachon CM, Vajdic CM, de Sanjose S, Weinberg JB, Benavente Y, Casabonne D, Liebow M, Nieters A, Hjalgrim H, Melbye M, Glimelius B, Adami HO, Boffetta P, Brennan P, Maynadie M, McKay J, Cocco PL, Shanafelt TD, Call TG, Norman A, Hanson C, Robinson D, Chaffee KG, Brooks-Wilson AR, Monnereau A, Clavel J, Glenn M, Curtin K, Conde L, Bracci PM, Morton LM, Cozen W, Severson RK, Chanock SJ, Spinelli JJ, Johnston JB, Rothman N, Skibola CF, Leis JF, Kay NE, Smedby KE, Berndt SI, Cerhan JR, Caporaso N, Slager SL.

Blood. 2018 Apr 19.

 

Azithromycin to Reduce Childhood Mortality in Sub-Saharan Africa.

Keenan JD, Bailey RL, West SK, Arzika AM, Hart J, Weaver J, Kalua K, Mrango Z, Ray KJ, Cook C, Lebas E, O'Brien KS, Emerson PM, Porco TC, Lietman TM; MORDOR Study Group.

N Engl J Med. 2018 Apr 26

 

Brief Report: Higher ART Adherence Is Associated With Lower Systemic Inflammation in Treatment-Naive Ugandans Who Achieve Virologic Suppression.

Castillo-Mancilla JR, Morrow M, Boum Y, Byakwaga H, Haberer JE, Martin JN, Bangsberg D, Mawhinney S, Musinguzi N, Huang Y, Tracy RP, Burdo TH, Williams K, Muzzora C, Hunt PW, Siedner MJ.

J Acquir Immune Defic Syndr. 2018 Apr 15;77(5):507-513.

 

Can survival bias explain the age attenuation of racial inequalities in stroke incidence? A simulation study.

Mayeda ER, Banack HR, Bibbins-Domingo K, Zeki Al Hazzouri A, Marden JR, Whitmer RA, Glymour MM.

Epidemiology. 2018 Apr 4.

 

A Canadian genome-wide association study and meta-analysis confirm HLA as a risk factor for peanut allergy independent of asthma.

Asai Y, Eslami A, van Ginkel CD, Akhabir L, Wan M, Yin D, Ellis G, Ben-Shoshan M, Marenholz I, Martino D, Ferreira MA, Allen K, Mazer B, de Groot H, de Jong NW, Gerth van Wijk R, Dubois AEJ, Grosche S, Ashley S, Rüschendorf F, Kalb B, Beyer K, Nöthen MM, Lee YA, Chin R, Cheuk S, Hoffman J, Jorgensen E, Witte JS, Melles RB, Hong X, Wang X, Hui J, Musk AWB, Hunter M, James AL, Koppelman GH, Sandford AJ, Clarke AE, Daley D.

J Allergy Clin Immunol. 2018 Apr;141(4):1513-1516.

 

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma.

Ricketts CJ, De Cubas AA, Fan H, Smith CC, Lang M, Reznik E, Bowlby R, Gibb

EA, Akbani R, Beroukhim R, Bottaro DP, Choueiri TK, Gibbs RA, Godwin AK, Haake S,

Hakimi AA, Henske EP, Hsieh JJ, Ho TH, Kanchi RS, Krishnan B, Kwaitkowski DJ, Lui

W, Merino MJ, Mills GB, Myers J, Nickerson ML, Reuter VE, Schmidt LS, Shelley CS,

Shen H, Shuch B, Signoretti S, Srinivasan R, Tamboli P, Thomas G, Vincent BG,

Vocke CD, Wheeler DA, Yang L, Kim WT, Robertson AG; Cancer Genome Atlas Research

Network, Spellman PT, Rathmell WK, Linehan WM.

Cell Rep. 2018

Apr 3;23(1):313-326.e5.

 

Cardiovascular Genetic Risk Testing for Targeting Statin Therapy in the Primary Prevention of Atherosclerotic Cardiovascular Disease: A Cost-Effectiveness Analysis.

Jarmul J, Pletcher MJ, Hassmiller Lich K, Wheeler SB, Weinberger M, Avery CL, Jonas DE, Earnshaw S, Pignone M.

Circ Cardiovasc Qual Outcomes. 2018 Apr;11(4):e004171.

 

Care Cascade for targeted tuberculosis testing and linkage to Care in Homeless

Populations in the United States: a meta-analysis.

Parriott A, Malekinejad M, Miller AP, Marks SM, Horvath H, Kahn JG.

BMC Public Health. 2018 Apr 12;18(1):485. doi: 10.1186/s12889-018-5393-x. PubMed PMID: 29650047; PubMed

 

Causal Thinking as a Critical Tool for Eliminating Social Inequalities in Health.

Glymour MM, Hamad R.

Am J Public Health. 2018 May;108(5):623.

 

Causes of death in long-term survivors of non-small cell lung cancer: A regional Surveillance, Epidemiology, and End Results study.

Kanitkar AA, Schwartz AG, George J, Soubani AO.

Ann Thorac Med. 2018 Apr-Jun;13(2):76-81.

 

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer.

Hoadley KA, Yau C, Hinoue T, Wolf DM, Lazar AJ, Drill E, Shen R, Taylor AM, Cherniack AD, Thorsson V, Akbani R, Bowlby R, Wong CK, Wiznerowicz M, Sanchez-Vega F, Robertson AG, Schneider BG, Lawrence MS, Noushmehr H, Malta TM; Cancer Genome Atlas Network, Stuart JM, Benz CC, Laird PW.

Cell. 2018 Apr 5;173(2):291-304.e6.

 

Cerebral Haemodynamics: Effects of Systemic Arterial Pulsatile Function and Hypertension.

Avolio A, Kim MO, Adji A, Gangoda S, Avadhanam B, Tan I, Butlin M.

Curr Hypertens Rep. 2018 Mar 19;20(3):20.

 

Cervical cancer screening through human papillomavirus testing in community

health campaigns versus health facilities in rural western Kenya.

Huchko MJ, Ibrahim S, Blat C, Cohen CR, Smith JS, Hiatt RA, Bukusi E.

Int J Gynaecol  Obstet. 2018 Apr;141(1):63-69.

 

Circulatory disease in French nuclear fuel cycle workers chronically exposed to uranium: a nested case-control study.

Zhivin S, Guseva Canu I, Davesne E, Blanchardon E, Garsi JP, Samson E,

Niogret C, Zablotska LB, Laurier D.

Occup Environ Med. 2018 Apr;75(4):270-276. doi: 10.1136/oemed-2017-104575. Epub 2017

Oct 31. PubMed PMID: 29089390.

 

Clinical Neurology and Epidemiology of the Major Neurodegenerative Diseases.

Erkkinen MG, Kim MO, Geschwind MD.

Cold Spring Harb Perspect Biol. 2018 Apr 2;10(4).

 

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas.

Liu Y, Sethi NS, Hinoue T, Schneider BG, Cherniack AD, Sanchez-Vega F, Seoane JA, Farshidfar F, Bowlby R, Islam M, Kim J, Chatila W, Akbani R, Kanchi RS, Rabkin CS, Willis JE, Wang KK, McCall SJ, Mishra L, Ojesina AI, Bullman S, Pedamallu CS, Lazar AJ, Sakai R; Cancer Genome Atlas Research Network, Thorsson V, Bass AJ, Laird PW.

Cancer Cell. 2018 Apr 9;33(4):721-735.e8.

 

Comprehensive Characterization of Cancer Driver Genes and Mutations.

Bailey MH, Tokheim C, Porta-Pardo E, Sengupta S, Bertrand D, Weerasinghe A, Colaprico A, Wendl MC, Kim J, Reardon B, Ng PK, Jeong KJ, Cao S, Wang Z, Gao J, Gao Q, Wang F, Liu EM, Mularoni L, Rubio-Perez C, Nagarajan N, Cortés-Ciriano I, Zhou DC, Liang WW, Hess JM, Yellapantula VD, Tamborero D, Gonzalez-Perez A, Suphavilai C, Ko JY, Khurana E, Park PJ, Van Allen EM, Liang H; MC3 Working Group; Cancer Genome Atlas Research Network, Lawrence MS, Godzik A, Lopez-Bigas N, Stuart J, Wheeler D, Getz G, Chen K, Lazar AJ, Mills GB, Karchin R, Ding L.

Cell. 2018 Apr 5;173(2):371-385.e18.

 

A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers.

Berger AC, Korkut A, Kanchi RS, Hegde AM, Lenoir W, Liu W, Liu Y, Fan H, Shen H, Ravikumar V, Rao A, Schultz A, Li X, Sumazin P, Williams C, Mestdagh P, Gunaratne PH, Yau C, Bowlby R, Robertson AG, Tiezzi DG, Wang C, Cherniack AD, Godwin AK, Kuderer NM, Rader JS, Zuna RE, Sood AK, Lazar AJ, Ojesina AI, Adebamowo C, Adebamowo SN, Baggerly KA, Chen TW, Chiu HS, Lefever S, Liu L, MacKenzie K, Orsulic S, Roszik J, Shelley CS, Song Q, Vellano CP, Wentzensen N;

Cancer Genome Atlas Research Network, Weinstein JN, Mills GB, Levine DA, Akbani R.

Cancer Cell. 2018 Apr 9;33(4):690-705.e9.

 

Computational design and experimental characterization of a novel β-common receptor inhibitory peptide.

Kilar CR, Sekharan S, Sautina L, Diao Y, Keinan S, Shen Y, Bungert J, Mohandas R, Segal MS.

Peptides. 2018 Apr 7;104:1-6.

 

Continued Transmission of HIV Among Young Adults Who Inject Drugs in San Francisco: Still Room for Improvement.

Mirzazadeh A, Evans JL, Hahn JA, Jain J, Briceno A, Shiboski S, Lum PJ, Bentsen C, Davis G, Shriver K, Dimapasoc M, Stone M, Busch MP, Page K.

AIDS Behav. 2018 Apr;22(4):1383-1394.

 

Correction to: Dietary intake of soy and cruciferous vegetables and treatment-related symptoms in Chinese-American and non-Hispanic White breast cancer survivors.

Nomura SJO, Hwang YT, Gomez SL, Fung TT, Yeh SL, Dash C, Allen L, Philips S,

Hilakivi-Clarke L, Zheng YL, Wang JH.

Breast Cancer Res Treat. 2018

Apr;168(2):481-482.

 

Defining Diarrhea: A Population-Based Validation Study of Caregiver-Reported

Stool Consistency in the Amhara Region of Ethiopia.

Aiemjoy K, Aragie S, Gebresillasie S, Fry DM, Dagnew A, Hailu D, Chanyalew M,

Tadesse Z, Stewart A, Callahan K, Freeman M, Neuhaus J, Arnold BF, Keenan JD.

Am J Trop Med Hyg. 2018 Apr;98(4):1013-1020.

 

Dietary intake of soy and cruciferous vegetables and treatment-related symptoms in Chinese-American and non-Hispanic White breast cancer survivors.

Nomura SJO, Hwang YT, Gomez SL, Fung TT, Yeh SL, Dash C, Allen L, Philips S,

Hilakivi-Clarke L, Zheng YL, Wang JH.

Breast Cancer Res Treat. 2018 Apr;168(2):467-479.

 

Distribution and performance of cardiovascular risk scores in a mixed population of HIV-infected and community-based HIV-uninfected individuals in Uganda.

Muiru AN, Bibangambah P, Hemphill L, Sentongo R, Kim JH, Triant VA, Bangsberg

DR, Tsai AC, Martin JN, Haberer JE, Boum Y 2nd, Plutzky J, Hunt PW, Okello S,

Siedner MJ.

J Acquir Immune Defic Syndr. 2018 Apr 11.

 

Does health insurance coverage or improved quality protect better against out-of-pocket payments? Experimental evidence from the Philippines.

Wagner N, Quimbo S, Shimkhada R, Peabody J.

Soc Sci Med. 2018 May;204:51-58.

 

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers.

Gao Q, Liang WW, Foltz SM, Mutharasu G, Jayasinghe RG, Cao S, Liao WW, Reynolds SM, Wyczalkowski MA, Yao L, Yu L, Sun SQ; Fusion Analysis Working Group; Cancer Genome Atlas Research Network, Chen K, Lazar AJ, Fields RC, Wendl MC, Van Tine BA, Vij R, Chen F, Nykter M, Shmulevich I, Ding L.

Cell Rep. 2018 Apr 3;23(1):227-238.e3.

 

Effect of Money-Back Guarantees on the Cost-Effectiveness of Proprotein Convertase Subtilisin/Kexin Type 9 Inhibitors.

Kazi DS, Penko J, Ollendorf DA, Coxson PG, Bibbins-Domingo K.

Ann Intern Med. 2018 Apr 3. doi:

 

Effectiveness of expanding annual mass azithromycin distribution treatment coverage for trachoma in Niger: a cluster randomised trial.

Amza A, Kadri B, Nassirou B, Cotter SY, Stoller NE, West SK, Bailey RL, Porco TC, Gaynor BD, Keenan JD, Lietman TM, Oldenburg CE.

Br J Ophthalmol. 2018 May;102(5):680-686.

 

Effectiveness of School-Based Teen Pregnancy Prevention Programs in the USA: a Systematic Review and Meta-Analysis.

Marseille E, Mirzazadeh A, Biggs MA, P Miller A, Horvath H, Lightfoot M, Malekinejad M, Kahn JG.

Prev Sci. 2018 May;19(4):468-489.

 

Efficacy of Subthreshold Newborn Phototherapy During the Birth Hospitalization in Preventing

Readmission for Phototherapy.

Wickremasinghe AC, Kuzniewicz MW, McCulloch CE, Newman TB.

JAMA Pediatr. 2018 Apr 1;172(4):378-385.

 

Elevated <i>HLA-A</i> expression impairs HIV control through inhibition of NKG2A-expressing cells.

Ramsuran V, Naranbhai V, Horowitz A, Qi Y, Martin MP, Yuki Y, Gao X, Walker-Sperling V, Del Prete GQ, Schneider DK, Lifson JD, Fellay J, Deeks SG, Martin JN, Goedert JJ, Wolinsky SM, Michael NL, Kirk GD, Buchbinder S, Haas D, Ndung'u T, Goulder P, Parham P, Walker BD, Carlson JM, Carrington M.

Science. 2018 Jan 5;359(6371):86-90.

 

An End-User Participatory Approach to Collaboratively Refine HIV Care Data, The New York State Experience.

Swain CA, Sawicki S, Addison D, Katz B, Piersanti K, Baim-Lance A, Gordon D,  Anderson BJ, Nash D, Steinbock C, Agins B.

AIDS Behav.  2018 Apr 2.

 

Epidemiology of uveitis in a US population-based study.

González MM, Solano MM, Porco TC, Oldenburg CE, Acharya NR, Lin SC, Chan MF.

J Ophthalmic Inflamm

Infect. 2018 Apr 17;8(1):6.

 

Epstein-Barr virus, high-risk human papillomavirus and abnormal cervical cytology in a prospective cohort of African female sex workers.

Cameron JE, Rositch AF, Vielot NA, Mugo NR, Kwatampora JKL, Waweru W, Gilliland AE, Hagensee ME, Smith JS.

Sex Transm Dis. 2018 Apr 17.

 

Estimated hepatitis C prevalence and key population sizes in San Francisco: A foundation for

elimination.

Facente SN, Grebe E, Burk K, Morris MD, Murphy EL, Mirzazadeh A, Smith AA, Sanchez MA, Evans JL, Nishimura A, Raymond HF; End Hep C SF.

PLoS One. 2018 Apr 11;13(4):e0195575.

 

Family History and Breast Cancer Risk Among Older Women in the Breast Cancer Surveillance Consortium Cohort.

Braithwaite D, Miglioretti DL, Zhu W, Demb J, Trentham-Dietz A, Sprague B, Tice JA, Onega T, Henderson LM, Buist DSM, Ziv E, Walter LC, Kerlikowske K; Breast Cancer Surveillance Consortium.

JAMA Intern Med. 2018 Apr 1;178(4):494-501.

 

Familial Association of Granulocyte-Macrophage Colony-Stimulating Factor Autoantibodies in Inflammatory Bowel Disease.

Wright SS, Trauernicht A, Bonkowski E, McCall CA, Maier EA, Bezold R, Lake K, Chalk C, Trapnell BC, Kim MO, Kugathasan S, Denson LA.

J Pediatr Gastroenterol Nutr. 2018 May;66(5):767-772.

 

A Fragility Index: Handle with Care.

Porco TC, Lietman TM.

Ophthalmology. 2018 May;125(5):649.

 

Gender, blood pressure, and cardiovascular and renal outcomes in adults with hypertension from the Systolic Blood Pressure Intervention Trial.

Foy CG, Lovato LC, Vitolins MZ, Bates JT, Campbell R, Cushman WC, Glasser SP, Gillespie A, Kostis WJ, Krousel-Wood M, Muhlestein JB, Oparil S, Osei K, Pisoni R, Segal MS, Wiggers A, Johnson KC; SPRINT Study Research Group.

J Hypertens. 2018 Apr;36(4):904-915.

 

Genome-Wide Association Studies of Cancer in Diverse Populations.

Park SL, Cheng I, Haiman CA.

Cancer Epidemiol Biomarkers Prev. 2018 Apr;27(4):405-417.

 

Genomic analysis of the origins and evolution of multicentric diffuse lower-grade gliomas.

Hayes J, Yu Y, Jalbert LE, Mazor T, Jones LE, Wood MD, Walsh KM, Bengtsson H, Hong C, Oberndorfer S, Roetzer T, Smirnov IV, Clarke JL, Aghi MK, Chang SM, Nelson SJ, Woehrer A, Phillips JJ, Solomon DA, Costello JF.

Neuro Oncol. 2018 Apr 9;20(5):632-641.

 

Genomic and Functional Approaches to Understanding Cancer Aneuploidy.

Taylor AM, Shih J, Ha G, Gao GF, Zhang X, Berger AC, Schumacher SE, Wang C,

Hu H, Liu J, Lazar AJ; Cancer Genome Atlas Research Network, Cherniack AD,

Beroukhim R, Meyerson M.

Cancer Cell. 2018 Apr 9;33(4):676-689.e3.

 

Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas.

Knijnenburg TA, Wang L, Zimmermann MT, Chambwe N, Gao GF, Cherniack AD, Fan H, Shen H, Way GP, Greene CS, Liu Y, Akbani R, Feng B, Donehower LA, Miller C, Shen Y, Karimi M, Chen H, Kim P, Jia P, Shinbrot E, Zhang S, Liu J, Hu H, Bailey  MH, Yau C, Wolf D, Zhao Z, Weinstein JN, Li L, Ding L, Mills GB, Laird PW, Wheeler DA, Shmulevich I; Cancer Genome Atlas Research Network, Monnat RJ Jr., Xiao Y, Wang C.

Cell Rep. 2018 Apr 3;23(1):239-254.e6.

 

Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas.

Campbell JD, Yau C, Bowlby R, Liu Y, Brennan K, Fan H, Taylor AM, Wang C, Walter V, Akbani R, Byers LA, Creighton CJ, Coarfa C, Shih J, Cherniack AD, Gevaert O, Prunello M, Shen H, Anur P, Chen J, Cheng H, Hayes DN, Bullman S, Pedamallu CS, Ojesina AI, Sadeghi S, Mungall KL, Robertson AG, Benz C, Schultz A, Kanchi RS, Gay CM, Hegde A, Diao L, Wang J, Ma W, Sumazin P, Chiu HS, Chen TW, Gunaratne P, Donehower L, Rader JS, Zuna R, Al-Ahmadie H, Lazar AJ, Flores ER, Tsai KY, Zhou JH, Rustgi AK, Drill E, Shen R, Wong CK; Cancer Genome Atlas

Research Network, Stuart JM, Laird PW, Hoadley KA, Weinstein JN, Peto M, Pickering CR, Chen Z, Van Waes C.

Cell Rep. 2018 Apr 3;23(1):194-212.e6.

 

Genotype-Specific Measles Transmissibility: A Branching Process Analysis.

Ackley SF, Hacker JK, Enanoria WTA, Worden L, Blumberg S, Porco TC, Zipprich

J. Clin Infect Dis. 2018 Apr 3;66(8):1270-1275.

 

Higher Absolute Lymphocyte Counts Predict Lower Mortality from Early-Stage Triple-Negative Breast Cancer.

Afghahi A, Purington N, Han SS, Desai M, Pierson E, Mathur MB, Seto T, Thompson CA, Rigdon J, Telli ML, Badve SS, Curtis C, West RB, Horst K, Gomez SL, Ford JM, Sledge GW, Kurian AW.

Clin Cancer Res. 2018 Mar 26. 

 

HIV sero disclosure among men who have sex with men and transgender women on HIV

pre-exposure prophylaxis.

Hojilla JC, Mehrotra M, Truong HM, Glidden DV, Amico KR, McMahan V, Vlahov D,

Chariyalertsak S, Guanira JV, Grant RM, For The iPrEx Study Team.

AIDS Care. 2018 Apr;30(4):466-472.

 

The Immune Landscape of Cancer.

Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CE; Cancer Genome Atlas Research Network, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich L. Immunity. 2018 Apr 17;48(4):812-830.e14.

 

Impact of individual and neighborhood factors on disparities in prostate cancer survival.

DeRouen MC, Schupp CW, Koo J, Yang J, Hertz A, Shariff-Marco S, Cockburn M, Nelson DO, Ingles SA, John EM, Gomez SL.

Cancer Epidemiol. 2018 Apr;53:1-11.

 

Implementation of Instrumental Variable Bounds for Data Missing Not at Random.

Marden JR, Wang L, Tchetgen EJT, Walter S, Glymour MM, Wirth KE.

Epidemiology. 2018 May;29(3):364-368.

 

Individuals have the right to avoid sex with partners unwilling to test for HIV but do not have a right to force them to test for HIV.

Ong JJ, Wei C, Pan S, Fu H, Tucker JD.

J Acquir Immune Defic Syndr. 2018 Apr 2.

 

Initial Metabolic Profiles Are Associated with 7-Day Survival among Infants Born at 22-25 Weeks of Gestation.

Oltman SP, Rogers EE, Baer RJ, Anderson JG, Steurer MA, Pantell MS, Partridge JC, Rand L, Ryckman KK, Jelliffe-Pawlowski LL.

J Pediatr. 2018 Apr 13.

 

Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types.

Ge Z, Leighton JS, Wang Y, Peng X, Chen Z, Chen H, Sun Y, Yao F, Li J, Zhang  H, Liu J, Shriver CD, Hu H; Cancer Genome Atlas Research Network, Piwnica-Worms H, Ma L, Liang H.

Cell Rep. 2018 Apr 3;23(1):213-226.e3. doi:

 

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

Liu J, Lichtenberg T, Hoadley KA, Poisson LM, Lazar AJ, Cherniack AD, Kovatich AJ, Benz CC, Levine DA, Lee AV, Omberg L, Wolf DM, Shriver CD, Thorsson V; Cancer Genome Atlas Research Network, Hu H.

Cell. 2018 Apr 5;173(2):400-416.e11.

 

Interest in Long-Acting Injectable PrEP in a Cohort of Men Who have Sex with Men in China.

Meyers K, Wu Y, Qian H, Sandfort T, Huang X, Xu J, Zhang J, Xia W, Glidden D, Wu H, Shang H.

AIDS Behav. 2018 Apr;22(4):1217-1227.

 

The Lancet Commission on malaria eradication.

Chen I, Cooney R, Feachem RGA, Lal A, Mpanju-Shumbusho W.

Lancet. 2018 Apr 16.

 

Language-concordant automated telephone queries to assess medication adherence in a diverse population: a cross-sectional analysis of convergent validity with pharmacy claims.

Ratanawongsa N, Quan J, Handley MA, Sarkar U, Schillinger D.

BMC Health Serv Res. 2018 Apr 6;18(1):254.

 

Lifetime marijuana use and subclinical atherosclerosis: the Coronary Artery Risk Development in Young Adults (CARDIA) study.

Auer R, Sidney S, Goff D, Vittinghoff E, Pletcher MJ, Allen NB, Reis JP, Lewis CE, Carr J, Rana JS.

Addiction. 2018 May;113(5):845-856.

 

Linking private, for-profit providers to public sector services for HIV and tuberculosis co-infected patients: A systematic review.

Hudson M, Rutherford GW, Weiser S, Fair E.

PLoS One. 2018 Apr 10;13(4):e0194960.

 

lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer.

Wang Z, Yang B, Zhang M, Guo W, Wu Z, Wang Y, Jia L, Li S; Cancer Genome Atlas Research Network, Xie W, Yang D.

Cancer Cell. 2018 Apr 9;33(4):706-720.e9.

 

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas.

Way GP, Sanchez-Vega F, La K, Armenia J, Chatila WK, Luna A, Sander C, Cherniack AD, Mina M, Ciriello G, Schultz N; Cancer Genome Atlas Research Network, Sanchez Y, Greene CS.

Cell Rep. 2018 Apr 3;23(1):172-180.e3.

 

Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation.

Malta TM, Sokolov A, Gentles AJ, Burzykowski T, Poisson L, Weinstein JN, Kamińska B, Huelsken J, Omberg L, Gevaert O, Colaprico A, Czerwińska P, Mazurek S, Mishra L, Heyn H, Krasnitz A, Godwin AK, Lazar AJ; Cancer Genome Atlas Research Network, Stuart JM, Hoadley KA, Laird PW, Noushmehr H, Wiznerowicz M.

Cell. 2018 Apr 5;173(2):338-354.e15.

 

Marine ω-3 Polyunsaturated Fatty Acid and Fish Intake after Colon Cancer Diagnosis and Survival: CALGB 89803 (Alliance).

Van Blarigan EL, Fuchs CS, Niedzwiecki D, Ye X, Zhang S, Song M, Saltz LB, Mayer RJ, Mowat RB, Whittom R, Hantel A, Benson A, Atienza D, Messino M, Kindler H, Venook A, Ogino S, Giovannucci EL, Meyerhardt JA.

Cancer Epidemiol Biomarkers Prev. 2018 Apr;27(4):438-445.

 

Maternal Black Race and Persistent Wheezing Illness in Former Extremely Low Gestational Age Newborns: Secondary Analysis of a Randomized Trial.

Wai KC, Hibbs AM, Steurer MA, Black DM, Asselin JM, Eichenwald EC, Ballard PL, Ballard RA, Keller RL; Trial of Late Surfactant (TOLSURF) Study Group.

J Pediatr. 2018 Apr 4. pii: S0022-3476(18)30220-8.

 

Maternal factors influencing late entry into prenatal care: a stratified analysis by race or ethnicity and insurance status.

Baer RJ, Altman MR, Oltman SP, Ryckman KK, Chambers CD, Rand L,

Jelliffe-Pawlowski LL.

J Matern Fetal Neonatal Med. 2018 Apr 22:1-7.

 

Molecular Characterization and Clinical Relevance of Metabolic Expression

Subtypes in Human Cancers.

Peng X, Chen Z, Farshidfar F, Xu X, Lorenzi PL, Wang Y, Cheng F, Tan L, Mojumdar K, Du D, Ge Z, Li J, Thomas GV, Birsoy K, Liu L, Zhang H, Zhao Z, Marchand C, Weinstein JN; Cancer Genome Atlas Research Network, Bathe OF, Liang H.

Cell Rep. 2018 Apr 3;23(1):255-269.e4.

 

Multimorbidity Among Persons Living with Human Immunodeficiency Virus in the United States.

Wong C, Gange SJ, Moore RD, Justice AC, Buchacz K, Abraham AG, Rebeiro PF, Koethe JR, Martin JN, Horberg MA, Boyd CM, Kitahata MM, Crane HM, Gebo KA, Gill MJ, Silverberg MJ, Palella FJ, Patel P, Samji H, Thorne J, Rabkin CS, Mayor A, Althoff KN; North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) .

Clin Infect Dis. 2018 Apr 3;66(8):1230-1238

 

Oncogenic Signaling Pathways in The Cancer Genome Atlas.

Sanchez-Vega F, Mina M, Armenia J, Chatila WK, Luna A, La KC, Dimitriadoy S, Liu DL, Kantheti HS, Saghafinia S, Chakravarty D, Daian F, Gao Q, Bailey MH, Liang WW, Foltz SM, Shmulevich I, Ding L, Heins Z, Ochoa A, Gross B, Gao J, Zhang H, Kundra R, Kandoth C, Bahceci I, Dervishi L, Dogrusoz U, Zhou W, Shen H, Laird PW, Way GP, Greene CS, Liang H, Xiao Y, Wang C, Iavarone A, Berger AH, Bivona TG, Lazar AJ, Hammer GD, Giordano T, Kwong LN, McArthur G, Huang C, Tward AD, Frederick MJ, McCormick F, Meyerson M; Cancer Genome Atlas Research Network, Van Allen EM, Cherniack AD, Ciriello G, Sander C, Schultz N.

Cell. 2018 Apr 5;173(2):321-337.e10. doi:

10.1016/j.cell.2018.03.035. PubMed PMID: 29625050.

 

Opioid Analgesics and Adverse Outcomes among Hemodialysis Patients.

Ishida JH, McCulloch CE, Steinman MA, Grimes BA, Johansen KL.

Clin J Am Soc Nephrol. 2018 Apr 19.

 

Osteoporosis and Hip Fracture Risk From Routine Computed Tomography Scans: The Fracture, Osteoporosis, and CT Utilization Study (FOCUS).

Adams AL, Fischer H, Kopperdahl DL, Lee DC, Black DM, Bouxsein ML, Fatemi S,  Khosla S, Orwoll ES, Siris ES, Keaveny TM.

J Bone Miner Res. 2018 Apr 17. doi: 10.1002/jbmr.3423.

 

A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples

Chen H, Li C, Peng X, Zhou Z, Weinstein JN; Cancer Genome Atlas Research Network, Liang H.

Cell. 2018 Apr 5;173(2):386-399.e12.

 

Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context.

Chiu HS, Somvanshi S, Patel E, Chen TW, Singh VP, Zorman B, Patil SL, Pan Y,  Chatterjee SS; Cancer Genome Atlas Research Network, Sood AK, Gunaratne PH, Sumazin P.

Cell Rep. 2018 Apr 3;23(1):297-312.e12. doi:

 

Pathogenic Germline Variants in 10,389 Adult Cancers.

Huang KL, Mashl RJ, Wu Y, Ritter DI, Wang J, Oh C, Paczkowska M, Reynolds S,  Wyczalkowski MA, Oak N, Scott AD, Krassowski M, Cherniack AD, Houlahan KE, Jayasinghe R, Wang LB, Zhou DC, Liu D, Cao S, Kim YW, Koire A, McMichael JF, Hucthagowder V, Kim TB, Hahn A, Wang C, McLellan MD, Al-Mulla F, Johnson KJ; Cancer Genome Atlas Research Network, Lichtarge O, Boutros PC, Raphael B, Lazar AJ, Zhang W, Wendl MC, Govindan R, Jain S, Wheeler D, Kulkarni S, Dipersio JF, Reimand J, Meric-Bernstam F, Chen K, Shmulevich I, Plon SE, Chen F, Ding L.

Cell. 2018 Apr 5;173(2):355-370.e14. doi: 10.1016/j.cell.2018.03.039. PubMed PMID: 29625052.

 

Patterns of care and outcomes in adolescent and young adult acute lymphoblastic leukemia:

a population-based study.

Muffly L, Alvarez E, Lichtensztajn D, Abrahão R, Gomez SL, Keegan T.

Blood Adv. 2018 Apr 24;2(8):895-903.

 

Personal and clinical social support and adherence to adjuvant endocrine therapy among hormone receptor-positive breast cancer patients in an integrated health care system.

Kroenke CH, Hershman DL, Gomez SL, Adams SR, Eldridge EH, Kwan ML, Ergas IJ,

Kubo A, Kushi LH.

Breast Cancer Res Treat. 2018 Apr 18.

 

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics.

Ding L, Bailey MH, Porta-Pardo E, Thorsson V, Colaprico A, Bertrand D, Gibbs  DL, Weerasinghe A, Huang KL, Tokheim C, Cortés-Ciriano I, Jayasinghe R, Chen F, Yu L, Sun S, Olsen C, Kim J, Taylor AM, Cherniack AD, Akbani R, Suphavilai C, Nagarajan N, Stuart JM, Mills GB, Wyczalkowski MA, Vincent BG, Hutter CM, Zenklusen JC, Hoadley KA, Wendl MC, Shmulevich L, Lazar AJ, Wheeler DA, Getz G; Cancer Genome Atlas Research Network.

Cell. 2018 Apr 5;173(2):305-320.e10.

 

Prediction to prevention in Alzheimer's disease and dementia.

Dufouil C, Glymour MM.

Lancet Neurol. 2018 May;17(5):388-389. doi:

 

Prevalence of Mathematical and Visuospatial Learning Disabilities in Patients With Posterior Cortical Atrophy.

Miller ZA, Rosenberg L, Santos-Santos MA, Stephens M, Allen IE, Hubbard HI, Cantwell A, Mandelli ML, Grinberg LT, Seeley WW, Miller BL, Rabinovici GD, Gorno-Tempini ML.

JAMA Neurol. 2018 Apr 9.

 

Primary care variability in patients at higher risk for colorectal cancer: evaluation of

screening and preventive care practices.

Peabody J, Saldivar JS, Swagel E, Fugaro S, Paculdo D, Tran M.

Curr Med Res Opin. 2018 May;34(5):851-856.

 

Racial/ethnic differences in the epidemiology of ovarian cancer: a pooled analysis of 12 case-control studies.

Peres LC, Risch H, Terry KL, Webb PM, Goodman MT, Wu AH, Alberg AJ, Bandera EV, Barnholtz-Sloan J, Bondy ML, Cote ML, Funkhouser E, Moorman PG, Peters ES, Schwartz AG, Terry PD Manichaikul A, Abbott SE, Camacho F, Jordan SJ, Nagle CM;  Australian Ovarian Cancer Study Group, Rossing MA, Doherty JA, Modugno F, Moysich K, Ness R, Berchuck A, Cook L, Le N, Brooks-Wilson A, Sieh W, Whittemore A, McGuire V, Rothstein J, Anton-Culver H, Ziogas A, Pearce CL, Tseng C, Pike M, Schildkraut JM; African American Cancer Epidemiology Study and the Ovarian Cancer Association Consortium.

Int J Epidemiol. 2018 Apr 1;47(2):460-472.

 

Reis et al. Respond.

Reis JP, Auer R, Bancks MP, Goff DC Jr., Lewis CE, Pletcher MJ, Rana JS, Shikany JM, Sidney S. Am J Public Health. 2018 Apr;108(4):e12.

 

Relationship of knee pain to time in moderate and light physical activities: Data from Osteoarthritis Initiative.

Song J, Chang AH, Chang RW, Lee J, Pinto D, Hawker G, Nevitt M, Dunlop DD.

Semin Arthritis Rheum. 2018 Apr;47(5):683-688.

 

Selecting and Improving Quasi-Experimental Designs in Effectiveness and Implementation Research.

Handley MA, Lyles CR, McCulloch C, Cattamanchi A.

Annu Rev Public Health. 2018 Apr 1;39:5-25.

 

Smartphone confocal microscopy for imaging cellular structures in human skin in vivo.

Freeman EE, Semeere A, Osman H, Peterson G, Rajadhyaksha M, González S, Martin JN, Anderson RR, Tearney GJ, Kang D.

Biomed Opt Express. 2018 Mar 26;9(4):1906-1915.

 

Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types.

Seiler M, Peng S, Agrawal AA, Palacino J, Teng T, Zhu P, Smith PG; Cancer Genome Atlas Research Network, Buonamici S, Yu L.

Cell Rep. 2018 Apr 3;23(1):282-296.e4.

 

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images.

Saltz J, Gupta R, Hou L, Kurc T, Singh P, Nguyen V, Samaras D, Shroyer KR, Zhao T, Batiste R, Van Arnam J; Cancer Genome Atlas Research Network, Shmulevich  I, Rao AUK, Lazar AJ, Sharma A, Thorsson V.

Cell Rep. 2018 Apr 3;23(1):181-193.e7.

 

Strengthening Routine Data Systems to Track the HIV Epidemic and Guide the Response in Sub-Saharan Africa.

Rice B, Boulle A, Baral S, Egger M, Mee P, Fearon E, Reniers G, Todd J, Schwarcz S, Weir S, Rutherford G, Hargreaves J.

JMIR Public Health Surveill. 2018 Apr 3;4(2):e36.

 

Streptococcal group A, C and G pharyngitis in school children: a prospective cohort study in Southern India.

Jose JJM, Brahmadathan KN, Abraham VJ, Huang CY, Morens D, Hoe NP, Follmann DA, Krause RM.

Epidemiol Infect. 2018 Apr 4:1-6.

 

Systematic Analysis of Splice-Site-Creating Mutations in Cancer.

Jayasinghe RG, Cao S, Gao Q, Wendl MC, Vo NS, Reynolds SM, Zhao Y, Climente-González H, Chai S, Wang F, Varghese R, Huang M, Liang WW, Wyczalkowski MA, Sengupta S, Li Z, Payne SH, Fenyö D, Miner JH, Walter MJ; Cancer Genome Atlas Research Network, Vincent B, Eyras E, Chen K, Shmulevich I, Chen F, Ding L.

Cell Rep. 2018 Apr 3;23(1):270-281.e3.

 

Treatment-Related Changes in Bone Turnover and Fracture Risk Reduction in Clinical Trials of Anti-Resorptive Drugs: A Meta-Regression.

Bauer DC, Black DM, Bouxsein ML, Lui LY, Cauley JA, de Papp AE, Grauer A, Khosla S, McCulloch CE, Eastell R; Foundation for the National Institutes of Health (FNIH) Bone Quality Project.

J Bone Miner Res. 2018 Apr;33(4):634-642.

 

Trends in Imaging Findings, Interventions, and Outcomes Among Children With Isolated Head Trauma.

Coon ER, Newman TB, Hall M, Wilkes J, Bratton SL, Schroeder AR.

Pediatr Emerg Care. 2018 Apr 24.