Publications: February – March 2025

VUStruct: a compute pipeline for high throughput and personalized structural biology.
bioRxiv, 2025-03-26
authors include Tony Capra

The cost of emulated target trials: Is real-world data cheaper than randomized studies?
Eur J Clin Invest, 2025-03-25
authors include Vinayak Prasad

Surrogate end points in oncology: the speed-uncertainty trade-off from the patients' perspective.
Nat Rev Clin Oncol, 2025-03-24
authors include Vinayak Prasad

Comparing chromatin contact maps at scale: methods and insights.
Nat Methods, 2025-03-19
authors include Tony Capra

Prenatal residential proximity to endocrine disrupting agricultural pesticides and menstrual cycle characteristics among Latina adolescents in California.
Am J Epidemiol, 2025-03-17
authors include Lucia Calderon

A turning point for global health: challenge or opportunity?
Lancet, 2025-03-12
authors include Mike Reid

Adding adjuvant drugs from distinct breast cancer trials.
J Cancer Policy, 2025-03-08
authors include Vinayak Prasad

HIV Viral Suppression With Use of Long-Acting Antiretroviral Therapy in People With and Without Initial Viremia.
JAMA, 2025-03-06
authors include Dave Glidden

To Reverse Rising Heart Failure Mortality, We Must Address Evidence Gaps.
Circ Cardiovasc Qual Outcomes, 2025-03-04
authors include Vinayak Prasad

Cost-Effectiveness of a Polypill for Cardiovascular Disease Prevention in an Underserved Population.
JAMA Cardiol, 2025-03-01
authors include Kirsten Bibbins-Domingo

Variations in digital health literacy for pediatric caregivers of hospitalized children: implications for digital health equity.
J Am Med Inform Assoc, 2025-03-01
authors include Dave Glidden

Queries on Sudden Infant Death Syndrome-Reply.
JAMA Pediatr, 2025-03-01
authors include Laura Jelliffe

The evolution of serious health-related suffering from 1990 to 2021: an update to The Lancet Commission on global access to palliative care and pain relief.
Lancet Glob Health, 2025-03-01
authors include Dean Jamison

Comparing perceptions of leading causes of death in a diverse sample of community-dwelling women in the United States.
Heart Lung, 2025-03-01
authors include Thomas Hoffmann

IMPACT OF SOCIAL VULNERABILITY ON TRENDS IN THE TREATMENT OF LOCALIZED PROSTATE CANCER IN COMMUNITY UROLOGY PRACTICES FROM 1998 TO 2017.
Urologic Oncology Seminars And Original Investigations, 2025-03-01
authors include Salma Shariff-Marco

INTERSECTION OF INDIVIDUAL-LEVEL SES, COMMUNITY LEVEL STRESSORS, AND TREATMENT OUTCOMES FOR MEN WITH INTERMEDIATE AND HIGH-RISK PROSTATE CANCER.
Urologic Oncology Seminars And Original Investigations, 2025-03-01
authors include Salma Shariff-Marco

Researcher Proposes New Framework for Language Equity in Health Technology.
JAMA, 2025-02-28
authors include Yulin Hswen

Breast, Colorectal, and Pancreatic Cancer Mortality With Pathogenic Variants in ATM, CHEK2, or PALB2.
J Clin Oncol, 2025-02-28
authors include Scarlett Gomez

Identifying deleterious noncoding variation through gain and loss of CTCF binding activity.
Am J Hum Genet, 2025-02-27
authors include Tony Capra

Cancer incidence and mortality estimates in 2022 in southeast Asia: a comparative analysis.
Lancet Oncol, 2025-02-27
authors include Scarlett Gomez

The History of Angina and Its Remedies: COURAGE, ORBITA, and a Path Forward.
Cardiol Rev, 2025-02-27
authors include Vinayak Prasad

The Pre-Medical Health Coach (PHC) program: pre-medical students as volunteer health coaches at a safety-net hospital in California, 2016-2020.
BMC Med Educ, 2025-02-27
authors include Kala Mehta

Discriminatory experiences, critical consciousness development, and well-being among emerging adults in and beyond the first year of the COVID-19 pandemic.
Dev Psychol, 2025-02-27
authors include Alison Cohen

Comparative characterization of human accelerated regions in neurons.
Nature, 2025-02-26
authors include Katie Pollard

Policing during a period of drug decriminalization: Experiences of people who use drugs in Oregon, USA.
Int J Drug Policy, 2025-02-26
authors include Barrot Lambdin

HIV-1 Gag-protease-driven replicative capacity influences T-cell metabolism, cytokine induction, and viral cell-to-cell spread.
mBio, 2025-02-25
authors include Matt Price

Facial Feminization Surgery and Mental Health Resource Utilization: A Retrospective Institutional Review.
Otolaryngol Head Neck Surg, 2025-02-25
authors include Alice Pressman

A systems analysis and improvement approach to optimizing syringe services programs' delivery of HIV testing and referrals: Study protocol for a parallel-group randomized controlled trial (SAIA-SSP-HIV).
PLoS One, 2025-02-25
authors include Barrot Lambdin

Socio-economic position, area-level deprivation and gradients in cancer incidence: England and Wales, 1971-2016.
BMC Public Health, 2025-02-24
authors include Robert Hiatt

Lifecourse Socioeconomic Status and Cognitive Performance Among Midlife Latina Women in a California Agricultural Region.
Am J Epidemiol, 2025-02-24
authors include Lucia Calderon

Left Ventricular Entry to Reduce Brain Lesions During Catheter Ablation: A Randomized Trial.
Circulation, 2025-02-24
authors include Feng Lin

Virtual reality or personal computer-based gynecologic pelvic exam simulation: medical student preferences.
BMC Med Educ, 2025-02-24
authors include Rosalyn Plotzker

Readiness of General Hospitals That Participate in Pediatric Quality Improvement Initiatives.
Hosp Pediatr, 2025-02-24
authors include Chuck McCulloch

Housing assistance among people who are unstably housed and use drugs in Oregon: a cross-sectional study.
BMC Public Health, 2025-02-23
authors include Barrot Lambdin

Identifying malaria risks amongst forest going populations in Mondulkiri province and Kampong Speu province, Cambodia: a large cross-sectional survey.
Malar J, 2025-02-22
authors include Ingrid Chen

FDA Approval Based on Novel Surrogate Endpoints: Lessons From the Voluntary Withdrawal of Voxelotor in Sickle Cell Disease.
Am J Hematol, 2025-02-21
authors include Vinayak Prasad

AI-Guided Lung Ultrasounds Could Help Nonexpert Clinicians Acquire "Expert-Level" Images.
JAMA, 2025-02-21
authors include Yulin Hswen

Redefining global health in the 21st century: Towards a more equitable global health agenda.
Glob Public Health, 2025-02-21
authors include Mike Reid

Foundations of a knee joint digital twin from qMRI biomarkers for osteoarthritis and knee replacement.
NPJ Digit Med, 2025-02-21
authors include Fei Jiang

A Trypanosoma cruzi Trans-Sialidase Peptide Demonstrates High Serological Prevalence Among Infected Populations Across Endemic Regions of Latin America.
medRxiv, 2025-02-21
authors include Caryn Bern and Stathis Gennatas

Gender-differences in imaging phenotypes of osteoarthritis in the osteoarthritis initiative.
Sci Rep, 2025-02-20
authors include John Lynch, Chuck McCulloch and Michael Nevitt

MRI-based analysis of thigh intramuscular fat and its associations with age, sex, and BMI using data from the osteoarthritis initiative data.
Sci Rep, 2025-02-20
authors include John Lynch, Chuck McCulloch and Michael Nevitt

Reaffirming the JAMA Network Commitment to the Health of Patients and the Public.
JAMA, 2025-02-20
authors include Kirsten Bibbins-Domingo

User acceptability and perceived impact of a mobile interactive education and support group intervention to improve postnatal health care in northern India: a qualitative study.
BMC Med Inform Decis Mak, 2025-02-20
authors include Nadia Diamond-Smith

Residential segregation and colorectal cancer screening in the United States, 2010-2018.
Cancer Epidemiol Biomarkers Prev, 2025-02-19
authors include Robert Hiatt and Salma Shariff-Marco

Illicit Substance Use and Treatment Access Among Adults Experiencing Homelessness.
JAMA, 2025-02-19
authors include Meghan Morris

Occupational Exposure to Low Dose Ionizing Radiation and the Incidence of Surgically Removed Cataracts and Glaucoma in a Cohort of Ontario Nuclear Power Plant Workers.
Radiat Res, 2025-02-19
authors include Lydia Zablotska

Depressive symptoms are associated with hippocampal volume in the oldest-old: The LifeAfter90 study.
Psychiatry Res Neuroimaging, 2025-02-19
authors include Rachel Whitmer

The Association Between Longer Maternal Leukocyte Telomere Length in the Immediate Postpartum Period and Preterm Birth in a Predominately Latina Cohort of Mothers.
Matern Child Health J, 2025-02-19
authors include Laura Jelliffe

Economic Insecurities and Mental Health Among Low-Income Pregnant People in the Central Valley Region of California.
Womens Health Issues, 2025-02-19
authors include Chuck McCulloch

Matrix Linear Models for Connecting Metabolite Composition to Individual Characteristics.
Metabolites, 2025-02-19
authors include Saunak Sen

Sensitive and modular amplicon sequencing of Plasmodium falciparum diversity and resistance for research and public health.
bioRxiv, 2025-02-19
authors include Adam Bennett and Jennifer Smith

Insights on HIV Care Engagement Strategies from Seven Interventions Serving Key Populations in the United States: A Qualitative Study.
AIDS Patient Care STDS, 2025-02-18
authors include Starley Shade

ChromaFactor: Deconvolution of single-molecule chromatin organization with non-negative matrix factorization.
PLoS Comput Biol, 2025-02-18
authors include Katie Pollard

Study Finds Limited Evidence to Support More Than 40 Predictive Machine Learning Algorithms Used in Primary Care.
JAMA, 2025-02-18
authors include Yulin Hswen

The Value of Academic Health Research.
JAMA, 2025-02-18
authors include Kirsten Bibbins-Domingo

Exposure to autoimmune disorders is associated with increased Alzheimer's disease risk in a multi-site electronic health record analysis.
Cell Rep Med, 2025-02-18
authors include Tony Capra

Effect of blood alcohol on the diagnostic accuracy of glial fibrillary acidic protein and ubiquitin carboxy-terminal hydrolase L1 for traumatic intracranial hemorrhage: A TRACK-TBI study.
Acad Emerg Med, 2025-02-18
authors include Amy Markowitz

Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning.
Elife, 2025-02-17
authors include Tony Capra

Targeting malaria in high-risk populations in low endemic regions in northern Namibia: a quasi-experimental controlled trial to reduce malaria in seasonal agricultural workers and cattle herders.
BMJ Glob Health, 2025-02-17
authors include Jennifer Smith and Adam Bennett

Trends in Timing of Preemptive Kidney Transplantation and Association with Allograft and Survival Outcomes in Children.
Clin J Am Soc Nephrol, 2025-02-17
authors include Chuck McCulloch

Improvement in anxiety symptoms during treatment of Hepatitis C in people who inject drugs: The HERO study.
Drug Alcohol Depend, 2025-02-15
authors include Kimberly Page

Immuno-epidemiologic mapping of HLA diversity across glioma patient cohorts.
Neuro Oncol, 2025-02-14
authors include Kyle Walsh

Unveiling the Genetic Landscape of Coronary Artery Disease Through Common and Rare Structural Variants.
J Am Heart Assoc, 2025-02-14
authors include Katie Pollard

Sexually transmitted human papillomavirus and related sequelae.
Clin Microbiol Rev, 2025-02-14
authors include Rosalyn Plotzker

Researchers Use Machine Learning to Put Older Clinical Guidelines to the Test.
JAMA, 2025-02-14
authors include Yulin Hswen

Endocrine Therapy Interruption, Resumption, and Outcomes Associated With Pregnancy After Breast Cancer.
JAMA Oncol, 2025-02-13
authors include Scarlett Gomez

High-throughput multiplexed serology via the mass-spectrometric analysis of isotopically barcoded beads.
Nat Biomed Eng, 2025-02-12
authors include Jeffrey Martin

Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort.
BMC Pregnancy Childbirth, 2025-02-12
authors include Tony Capra

Human genomic regions of systemic interindividual epigenetic variation are implicated in neurodevelopmental and metabolic disorders.
medRxiv, 2025-02-12
authors include Joe Wiemels

The Lilienfeld Award of the American College of Epidemiology - Not Staying in Our Lane, September 11, 2024.
Ann Epidemiol, 2025-02-11
authors include Robert Hiatt

How AI Could Help Clinicians Identify American Indian Patients at Risk for Suicide.
JAMA, 2025-02-11
authors include Yulin Hswen

Estimating the number of primary versus incidental COVID-19 hospitalizations in Santa Clara County.
Open Forum Infectious Diseases, 2025-02-11
authors include Wayne Enanoria

Genome-wide association study of prostate-specific antigen levels in 392,522 men identifies new loci and improves prediction across ancestry groups.
Nat Genet, 2025-02-10
authors include Thomas Hoffmann, John Witte and Rebecca Graff

Mortality risk assessment using deep learning-based frequency analysis of electroencephalography and electrooculography in sleep.
Sleep, 2025-02-10
authors include Katie Stone

Parental Education, Midlife Hypertension, and Disparities in Late-Life Cognitive Test Scores: Application of an Equity-Focused Causal Decomposition Approach.
Alzheimer Dis Assoc Disord, 2025-02-10
authors include Rachel Whitmer

Evaluating social vulnerability as a key determinant of definitive treatment for Black men with clinically localized prostate cancer.
Journal Of Clinical Oncology, 2025-02-10
authors include Salma Shariff-Marco

Examining community social vulnerability domains and influence on treatment selection for men with prostate cancer.
Journal Of Clinical Oncology, 2025-02-10
authors include Salma Shariff-Marco

Exploring social vulnerability in prostate cancer management: Insights into utilization of watchful waiting and active surveillance from 1998 to 2017.
Journal Of Clinical Oncology, 2025-02-10
authors include Salma Shariff-Marco

War Trauma and Strength: A Qualitative Study of Participants in the Vietnamese Insights into Cognitive Aging Program (VIP).
J Gerontol B Psychol Sci Soc Sci, 2025-02-09
authors include Rachel Whitmer

Lessons from COVID-19 patient visitation restrictions: six considerations to help develop ethical patient visitor policies.
Monash Bioeth Rev, 2025-02-08
authors include Vinayak Prasad

Cannabis Dependence Among Georgian Small-Scale Cannabis Growers: Results of a Cross-Sectional Online Survey.
J Psychoactive Drugs, 2025-02-07
authors include Ali Mirzazadeh

Analysis of Tanner stage in children conceived after the diagnosis of infertility: the DESCRT study.
J Assist Reprod Genet, 2025-02-07
authors include Lydia Zablotska

The Value of Academic Health Research.
JAMA Health Forum, 2025-02-07
authors include Kirsten Bibbins-Domingo

The impact of trauma and how to intervene: a narrative review of psychotraumatology over the past 15 years.
Eur J Psychotraumatol, 2025-02-06
authors include Matt Price

Derivation of Best-Practice Scan Speeds and Excess Scan Durations for CT Pulmonary Angiography: Analysis Using Registry Data for 166,769 Examinations Across 121 Sites.
AJR Am J Roentgenol, 2025-02-05
authors include Rebecca Smith-Bindman

Galectin 9 Levels as a Potential Predictor of Intact HIV Reservoir Decay.
J Infect Dis, 2025-02-04
authors include Peter Bacchetti

A semantic strength and neural correlates in developmental dyslexia.
Front Psychol, 2025-02-04
authors include Fei Jiang

Unraveling the genetic landscape of susceptibility to multiple primary cancers.
HGG Adv, 2025-02-04
authors include John Witte, Rebecca Graff and Thomas Hoffmann

Gut microbiome metagenomic sequences of honey bees (Apis mellifera) exposed to crops.
Microbiol Resour Announc, 2025-02-04
authors include Thomas Newman

Five ways to bridge the 'know-do' continuum in global health.
Nat Hum Behav, 2025-02-03
authors include Dominic Montagu

Race and Ethnicity, Lifestyle, Diet, and Survival in Patients With Prostate Cancer.
JAMA Netw Open, 2025-02-03
authors include June Chan

Author Correction: Genetically adjusted PSA levels for prostate cancer screening.
Nat Med, 2025-02-03
authors include John Witte, Rebecca Graff and Thomas Hoffmann

Measuring Implementation Outcomes Change Over Time Using an Adapted Checklist for Assessing Readiness to Implement (CARI).
AIDS Behav, 2025-02-03
authors include Starley Shade

Interest in Injectable and Oral PrEP for HIV Prevention Among Women and Men Who Inject Drugs.
J Addict Med, 2025-02-03
authors include Kimberly Page

Depression Treatment After a Positive Depression Screen Result.
JAMA Intern Med, 2025-02-01
authors include John Neuhaus

Independent associations of high-density lipoprotein cholesterol and triglyceride levels with Alzheimer's disease and related dementias.
Alzheimers Dement, 2025-02-01
authors include Maria Glymour, Minhyuk Choi, Thomas Hoffmann, Neil Risch and Rachel Whitmer

Methods to crosswalk between cognitive test scores using data from the Alzheimer's Disease Neuroimaging Cohort.
Alzheimers Dement, 2025-02-01
authors include Maria Glymour

Grade-stratified meningioma risk among individuals who are non-Hispanic Black and interactions with male sex.
J Natl Cancer Inst, 2025-02-01
authors include Kyle Walsh

Low Uptake of Lipid Screening-Concerning Nonadherence or Appropriate Skepticism?
JAMA Pediatr, 2025-02-01
authors include Thomas Newman

Preferences for HIV pre-exposure prophylaxis formulations and delivery among young African women: results of a discrete choice experiment.
J Int AIDS Soc, 2025-02-01
authors include Jennifer Velloza

20-Year income volatility and cognitive function in the National Longitudinal Survey of Youth (1979) cohort: A replication and extension of CARDIA findings.
Soc Sci Med, 2025-02-01
authors include Maria Glymour

Skin Cancer Diagnosis by Lesion, Physician, and Examination Type: A Systematic Review and Meta-Analysis.
JAMA Dermatol, 2025-02-01
authors include Mi-Ok Kim

Genome-Wide Association Analyses of HPV16 and HPV18 Seropositivity Identify Susceptibility Loci for Cervical Cancer.
J Med Virol, 2025-02-01
authors include John Witte

Risk Factors for Viral Coinfections in Blood Donors in Bahia, Brazil.
J Med Virol, 2025-02-01
authors include Kimberly Page

M101 Overdose as a Complex Contagion: Modeling the Community Spread of Overdose Events Following Law Enforcement Efforts to Disrupt the Drug Market.
Drug And Alcohol Dependence, 2025-02-01
authors include Barrot Lambdin

M91 “We’re Real Harm Reduction.not Performative Harm Reduction”: Exploring How Organizational Values Shape the Delivery of Health Services Within Syringe Services Programs.
Drug And Alcohol Dependence, 2025-02-01
authors include Barrot Lambdin

The Landscape of HIV Services Delivery in U.S. Syringe Services Programs: A Qualitative Exploration of Current Models and Opportunities.
Drug And Alcohol Dependence, 2025-02-01
authors include Barrot Lambdin

WCN25-3361 SYSTOLIC BLOOD PRESSURE (SBP) AND RISK OF MORTALITY IN PATIENTS ON MAINTENANCE PERITONEAL DIALYSIS (PD): A SYSTEMATIC VIEW AND META-ANALYSIS.
Kidney International Reports, 2025-02-01
authors include Mohsen Malekinejad

Association of walking cadence to changes in knee pain and physical function: The multicenter osteoarthritis study.
Osteoarthr Cartil Open, 2025-02-01
authors include Michael Nevitt